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Datasets

88 datasets

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Protein Clusters

A collection of Reference Sequence (RefSeq) proteins, from the complete genomes of prokaryotes, plasmids, and organelles, that have been grouped and annotated based on sequence similarity and protein function.

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Updated Oct 29, 2026

HealthData.Gov

Conserved Domain Database (CDD)

Conserved Domain Database (CDD) is a protein annotation resource that consists of a collection of well-annotated multiple sequence alignment models for ancient domains and full-length proteins.

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Updated Oct 29, 2026

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Consensus CDS (CCDS)

The Consensus CDS (CCDS) project is a collaborative effort to identify a core set of human and mouse protein coding regions that are consistently annotated and of high quality. The long term goal is to support…

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Updated Oct 29, 2026

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Protein

The Protein database is a collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB. Protein…

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Updated Oct 29, 2026

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CDTree

CDTree is a stand-alone application for classifying protein sequences and investigating their evolutionary relationships. CDTree can import, analyze and update existing Conserved Domain (CDD) records and hierarchies,…

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Updated Oct 29, 2026

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Value Set Authority Center

The VSAC is a repository and authoring tool for public value sets created by external programs. Value sets are lists of codes and corresponding terms, from NLM-hosted standard clinical vocabularies (such as SNOMED CT®,…

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Updated Oct 29, 2026

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Database of Genomic Structural Variation (dbVar)

Database of Genomic Structural Variation (dbVar) is NCBI's database of human genomic Structural Variation — large variants >50 bp including insertions, deletions, duplications, inversions, mobile elements,…

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Updated Oct 29, 2026

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SNOMED CT

SNOMED CT is one of a suite of designated standards for use in U.S. Federal Government systems for the electronic exchange of clinical health information and is also a required standard in interoperability…

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Updated Oct 29, 2026

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Third Party Annotation (TPA) Database

A database that contains sequences built from the existing primary sequence data in GenBank. The sequences and corresponding annotations are experimentally supported and have been published in a peer-reviewed scientific…

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Updated Oct 29, 2026

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PubChem

PubChem contains the chemical structures of small organic molecules and information on their biological activities. PubChem includes substance information, compound structures, and bioactivity data in three primary…

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Updated Oct 29, 2026

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RefSeq: NCBI Reference Sequence Database

A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

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Updated Oct 29, 2026

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Retrovirus Resources

Information about retroviruses and specialized tools for the analysis of retroviral proteins and genomes. The tools on this page aid in the identification, study and analysis of retroviral genomes and proteins. For…

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Updated Oct 29, 2026

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NCBI ASN.1 Format Summary

An International Standards Organization (ISO) data representation format used to achieve interoperability between platforms.

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Updated Oct 29, 2026

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Visible Human Project

The NLM Visible Human Project® has created publicly-available complete, anatomically detailed, three-dimensional representations of a human male body and a human female body. Specifically, the VHP provides a…

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Updated Oct 29, 2026

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Whole Genome Shotgun Submissions

Whole Genome Shotgun (WGS) projects are genome assemblies of incomplete genomes or incomplete chromosomes of prokaryotes or eukaryotes that are generally being sequenced by a whole genome shotgun strategy. WGS projects…

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Updated Oct 29, 2026

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Pathogen Detection (BETA)

NCBI Pathogen Detection integrates bacterial pathogen genomic sequences originating in food, environmental sources, and patients. It quickly clusters and identifies related sequences to uncover potential food…

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Updated Oct 29, 2026

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NIH Common Data Elements Repository

The NIH Common Data Elements (CDE) Repository has been designed to provide access to structured human and machine-readable definitions of data elements that have been recommended or required by NIH Institutes and…

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Updated Oct 29, 2026

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MedlinePlus

MedlinePlus is the National Institutes of Health's Web site for patients and their families and friends. Produced by the National Library of Medicine, the world’s largest medical library, it brings you information about…

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Updated Oct 29, 2026

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Structured Abstracts

Information about abstracts with distinct, labeled sections (e.g., Introduction, Methods, Results, discussion) that appear in MEDLINE.

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Updated Oct 29, 2026

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ClinVar

ClinVar aggregates information about genomic variation and its relationship to human health.

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Updated Oct 29, 2026

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