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Datasets

56 datasets

HealthData.Gov

Medical Subject Headings (MeSH)

Medical Subject Headings (MeSH) is a hierarchically-organized terminology for indexing and cataloging of biomedical information. It is used for the indexing of PubMed and other NLM databases. Please see the Terms and…

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Updated Oct 29, 2026

HealthData.Gov

IndexCat

IndexCat provides access to the digitized version of the printed Index-Catalogue of the Library of the Surgeon General's Office; eTK for medieval Latin texts; and eVK2 for medieval English texts; along with links to…

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Updated Oct 29, 2026

HealthData.Gov

History of Medicine Finding Aids

HMD Finding Aids is the central access point for electronic finding aids provided by the Archives and Modern Manuscripts and Prints and Photographs collections.

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Updated Oct 29, 2026

HealthData.Gov

BLAST (Basic Local Alignment Search Tool)

BLAST (Basic Local Alignment Search Tool) finds regions of similarity between biological sequences. BLAST includes several specialized search interfaces: SmartBLAST, Primer-BLAST, Global Align, CD-Search, IgBLAST,…

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Updated Oct 29, 2026

HealthData.Gov

AccessGUDID

The Global Unique Device Identification Database (GUDID) contains key device identification information submitted to the FDA about medical devices that have Unique Device Identifiers (UDI).

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Updated Oct 29, 2026

HealthData.Gov

Gene

Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific…

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Updated Oct 29, 2026

HealthData.Gov

Computational Photography Project for Pill Identification (C3PI)

The Computational Photography Project for Pill Identification (C3PI) was sunset in 2018. No new images will be added to the collection. Identifiers for pills will not be updated. Images and metadata are for research and…

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Updated Oct 29, 2026

HealthData.Gov

PubMed

PubMed comprises more than 26 million citations for biomedical literature from MEDLINE, life science journals, and online books. Citations may include links to full-text content from PubMed Central and publisher web…

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Updated Oct 29, 2026

HealthData.Gov

NCBI Datasets

NCBI Datasets is one-stop shop for finding, browsing, and downloading genomic data. Find and download taxonomy, genome, gene, transcript, protein data, including installation of NCBI Datasets command-line tools.

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Updated Oct 29, 2026

HealthData.Gov

ProSplign

A utility for computing alignment of proteins to genomic nucleotide sequence based on a variation of the Needleman Wunsch global alignment algorithm and specifically accounts for introns and splice signals.

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Updated Oct 29, 2026

HealthData.Gov

Protein

The Protein database is a collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB. Protein…

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Updated Oct 29, 2026

HealthData.Gov

CDTree

CDTree is a stand-alone application for classifying protein sequences and investigating their evolutionary relationships. CDTree can import, analyze and update existing Conserved Domain (CDD) records and hierarchies,…

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Updated Oct 29, 2026

HealthData.Gov

GEO (Gene Expression Omnibus)

GEO (Gene Expression Omnibus) is a public functional genomics data repository supporting MIAME-compliant data submissions. There are also tools provided to help users query and download experiments and curated gene…

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Updated Oct 29, 2026

HealthData.Gov

SNOMED CT

SNOMED CT is one of a suite of designated standards for use in U.S. Federal Government systems for the electronic exchange of clinical health information and is also a required standard in interoperability…

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Updated Oct 29, 2026

HealthData.Gov

Retrovirus Resources

Information about retroviruses and specialized tools for the analysis of retroviral proteins and genomes. The tools on this page aid in the identification, study and analysis of retroviral genomes and proteins. For…

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Updated Oct 29, 2026

HealthData.Gov

Database of Genomic Structural Variation (dbVar)

Database of Genomic Structural Variation (dbVar) is NCBI's database of human genomic Structural Variation — large variants >50 bp including insertions, deletions, duplications, inversions, mobile elements,…

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Updated Oct 29, 2026

HealthData.Gov

RxTerms

RxTerms is a drug interface terminology derived from RxNorm for prescription writing or medication history recording (e.g. in e-prescribing systems, PHRs). RxTerms is derived only from the non-proprietary content of…

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Updated Oct 29, 2026

HealthData.Gov

MEDLINE/PubMed Citations

PubMed is a free resource supporting the search and retrieval of biomedical and life sciences literature with the aim of improving health–both globally and personally. The PubMed database contains citations and…

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Updated Oct 29, 2026

HealthData.Gov

Protein Clusters

A collection of Reference Sequence (RefSeq) proteins, from the complete genomes of prokaryotes, plasmids, and organelles, that have been grouped and annotated based on sequence similarity and protein function.

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Updated Oct 29, 2026

HealthData.Gov

Database of Genotype and Phenotype (dbGaP)

Database of Genotype and Phenotype (dbGaP) was developed to archive and distribute the data and results from studies that have investigated the interaction of genotype and phenotype in Humans.

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Updated Oct 29, 2026

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